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BIOINFORMATICS MSc.

PROBABILITY & STATISTICS 2005-2006

Course Notes

SPLUS Exercise Sheets

Week 1  Splus Intro Intro.ssc

Week 2  TMPproteinlengthdata.txt proteinlengthdata.txt SPLUS Sheet02

Week 3  Alldata.zip ALLData.csv AMLData.csv SPLUS Sheet03

Week 4  Cluster.zip

Week 5

 

SPLUS Scripts

WEEK 1 : sheet01.ssc  sheet01-solutions.ssc

WEEK 2 : sheet02.ssc

WEEK 3 : sheet03.ssc

WEEK 4 : sheet04.ssc sheet04.R

WEEK 5:  Array Normalization

BACKGROUND CORRECTED

NOT BACKGROUND CORRECTED

HE15.SSC (Wild Type Heterozygote, Day 15) HE15.SSC (Wild Type Heterozygote, Day 15)
HE16.SSC (Wild Type Heterozygote, Day 16) HE16.SSC (Wild Type Heterozygote, Day 16)
KO15.SSC (Knock out Heterozygote, Day 15) KO15.SSC (Knock out Heterozygote, Day 15)
KO16.SSC (Knock out Heterozygote, Day 16) KO16.SSC (Knock out Heterozygote, Day 16)

Data

 

Extra Splus Scripts

Analysis of Protein Length Data

Simulating a Markov Chain

Principal Components for the Golub Data

Simulating a Poisson Process

Simulating a Random Walk