|
|
Systems and Signals |
|
|
Papers |
|
|
You'll find an informal, popular, discussion of our
published work on our blog.
Our published papers generally have a corresponding blog article. 2015: eLife BLOG
article Iain G Johnston, Joerg P Burgstaller, Vitezslav Havlicek, Thomas
Kolbe, Thomas Rulicke, Gottfried Brem, Jo Poulton, Nick S Jones Energetic constraints on fungal
growth American Naturalist Luke L.M. Heaton, Nick S Jones,
Mark Fricker Proceedings of the Royal Society
A BLOG
article Iain G. Johnston, Nick S. Jones What
is the function of mitochondrial networks? (supplement) BioEssays BLOG
article Hanne Hoitzing, Iain G. Johnston, Nick S.
Jones Spectra and cycle structure of trophically coherent graphs arXiv Samuel Johnson, Nick S. Jones 2014: The
mitoflash probe cpYFP
does not respond to superoxide - Brief Communication Arising Nature BLOG
article Markus Schwarzlander,
S.Wagner, Y.Ermakova, V.V.Belousov, R.Radi, J.S.Beckman, G.R.Buettner, N.Demaurex, M.R.Duchen, H.J.Forman, M.D.Fricker, D.Gems, A.P. Halestrap, B.Halliwell, U.Jakob, Iain G.
Johnston, Nick S. Jones, D.C. Logan, B.Morgan, F.L.Muller, D.G.Nicholls, S.James Remington, P.T.Schumacker,
C.C.Winterbourn, L.J.Sweetlove,
A.J.Meyer, T.P.Dick and
Michael P. Murphy Explicit tracking of uncertainty increases the power of quantitative rule-of-thumb reasoning in cell biology (CaladisWebsite, Nature Toolbox examples) Biophysical Journal BLOG
article Iain G. Johnston, Ben Rickett, Nick S. Jones FRIENDLY
regulates mitochondrial distribution, fusion, and quality control in
Arabidopsis Plant Physiology BLOG
article Amr El Zawily, Markus Schwarzlsnder, Iris Finkemeier,
Iain G Johnston, Abdelilah Benamar,Yongguo
Cao, Clemence Gissot,
Andreas Meyer, Ken Wilson, Raju Datla,
David Macherel, Nick S. Jones and David Logan Proceedings of the Royal Society
A Binh-Minh Bui-Xuan, Nick S. Jones mtDNA Segregation in Heteroplasmic
Tissues Is Common In Vivo and Modulated by Haplotype
Differences and Developmental Stage (supplement) Cell Reports BLOG
article Joerg Patrick Burgstaller, Iain G.
Johnston, Nick S. Jones, J. Albrechtova, T. Kolbe,
C. Vogl, A. Futschik, C. Mayrhofer, D. Klein, S. Sabitzer,
M. Blattner, C. Gully, J. Poulton,
T. Rulicke, J. Pialek, R.
Steinborn, G. Brem Highly comparative, feature-based,
time-series classification (supplement)
IEEE Transactions in KDE BLOG
article Ben Fulcher,
Nick S. Jones 2013: Highly
Comparative Time-Series Analysis: the empirical structure of time series and
their methods (super
supplement, rest
of supplement) Journal of the Royal Society
Interface BLOG
article Ben Fulcher,
Max Little, Nick S. Jones Signal
Processing and Inference for the Physical Sciences (volume) Philosophical Transactions of
the Royal Society A BLOG
article Editors Nick S. Jones and Thomas
J. Maccarone Inference
for the Physical Sciences (introduction) Phil. Trans. R. Soc. A. 371
20120493 BLOG
article Nick S. Jones and Thomas J. Maccarone Signal
processing for molecular and cellular biological physics Phil. Trans. R. Soc. A. 371
20110546 Max Little and Nick S. Jones Function-valued
traits in evolution (supplement) Journal of the Royal Society Interface BLOG
article Pantelis Z. Hadjipantelis, Nick S. Jones, John Moriarty, David Springate, Christopher G. Knight. Evolutionary Inference for Functional
Data: Using Gaussian Processes on Phylogenies to Study Shape Evolution (journal
version, supplement) Journal of the Royal Society
Interface, 10, 20120616 BLOG
article Nick S. Jones, John Moriarty 2012: Highly
Comparative Fetal Heart Rate Analysis (conference paper) Engineering in Medicine and Biology Society (EMBC), 2012 Annual International Conference of the IEEE Ben Fulcher, Alexandra Georgieva, Chris Redman and Nick S. Jones What
Evidence is There for the Homology of Protein-Protein Interactions? (supplement)
PLoS Computational Biology 8(9): e1002645 BLOG
article Anna Lewis, Nick S Jones, Mason
Porter, Charlotte Deane Advection,
diffusion and delivery over a network (supplement)
Phys. Rev. E 86, 021905 BLOG
article Luke L. M. Heaton, Eduardo
Lopez, Philip K. Maini, Mark D. Fricker,
Nick S. Jones Analysis of fungal networks Fungal Biology Reviews doi:10.1016/j.fbr.2012.02.001. Luke L. M. Heaton, Boguslaw Obara, Vincente Grau, Nick S. Jones, Toshi Nakagaki, Lynne Boddy, Mark D. Fricker Taxonomies of
Networks from Community Structure (supplement) Phys. Rev. E 86, 036104 BLOG
article Jukka-Pekka Onnela, Daniel J. Fenn, Stephen Reid, Mason A. Porter, Peter J. Mucha, Mark D. Fricker, Nick S. Jones Mitochondrial
Variability as a Source of Extrinsic Cellular Noise (supplement)
PLoS Computational Biology 8(3): e1002416.
doi:10.1371/journal.pcbi.1002416
BLOG
article Iain G. Johnston, Bernadett Gaal, Ricardo Pires das Neves, Tariq Enver, Francisco J. Iborra,
Nick S. Jones Pulsing of Membrane Potential in Individual Mitochondria: A
Stress-Induced Mechanism to Regulate Respiratory Bioenergetics in Arabidopsis Dynamical Clustering of Exchange Rates Quantitative Finance 12, 1493-1520 Daniel J. Fenn, Mason A.
Porter, Peter J. Mucha, Mark McDonald, Stacy
Williams, Neil F. Johnson, Nick S.
Jones 2011: Trends in Evolution and Ecology
(free
version and non-free weblink) 27,
160-166 BLOG
article John Aston, Dorothy Buck, John
Coleman, Colin Cotter, Nick S. Jones, Vincent Macaulay, Norman Macleod, John
Moriarty, Andrew Nevins. Biophysical Journal 2, 477 BLOG article M.A. Little, B.C. Steel, F. Bai,
Y. Sowa, T. Bilyard, D.M. Mueller, R.M. Berry, N.S. Jones Proceedings of the Royal Society A, 467, 2088 BLOG article M.A. Little N.S.
Jones Generalized
methods and solvers for noise removal from piecewise constant signals. II.
New Methods Proceedings of the Royal Society A, 467, 3115 BLOG article M.A. Little N.S. Jones Temporal
evolution of financial-market correlations Phys. Rev. E 84,
026109 BLOG article D.J. Fenn,
M.A. Porter, S. Williams, M. McDonald, N.F. Johnson and N.S. Jones 2010:
PLoS Biology 8(12): e1000560 doi:10.1371/journal.pbio.1000560 BLOG article Ricardo Pires
das Neves, Nick S. Jones, Lorena Andreu, Rajeev Gupta, Tariq Enver,
Francisco J. Iborra Growth-induced
mass flows in fungal networks Proceedings of the Royal
Society B 277, 3265 BLOG article Luke Heaton, Eduardo Lopez,
Philip K. Maini, Mark D. Fricker,
Nick S. Jones Revisiting Date and Party Hubs: Novel Approaches to Role
Assignment in Protein Interaction Networks PLoS Computational Biology 6(6):e1000817 BLOG article Sumeet Agarwal, Charlotte M. Deane,
Mason A. Porter, Nick S. Jones The Function of Communities in Protein Interaction Networks at
Multiple Scales BMC Systems Biology 4, 100 BLOG article Anna C. F. Lewis, Nick S. Jones,
Mason A. Porter, Charlotte M. Deane
Ecology Letters 13, 891 doi: 10.1111/j.1461-0248.2010.01485.x Phillip P. A. Staniczenko, Owen T. Lewis, Nick S. Jones, Felix Reed-Tsochas Sparse bayesian
step-filtering for high-throughput analysis of molecular machine dynamics (conference paper) Proceedings
IEEE ICASP 2010 p4162 Max A. Little and Nick S. Jones
Dynamic communities in multichannel data Chaos 19, 033119 (2009) BLOG article Daniel J. Fenn,
Mason A. Porter, Mark McDonald, Stacy Williams, Neil F. Johnson, Nick S.
Jones Master-equation analysis of accelerating networks Phys. Rev. E 79, 056101 (2009) David M.D. Smith, Jukka-Pekka Onnela, Nick S.
Jones Phys. Rev. E 79, 011915 (2009) Phillip P. A. Staniczenko, Chiu Fan Lee, Nick S. Jones Using the Memories of Multiscale
Machines to Characterize Complex Systems Phys. Rev. Lett.
100, 208702 (2008) Nick S. Jones Key Distillation and the Secret-Bit Fraction IEEE Transactions Information
Theory, 54, 680 (2008) Nick S. Jones and Lluis Masanes Early work: Photon Frequency Mode Matching using Acousto-Optic
Frequency Beam Splitters Phys. Rev. A 73, 033813 (2006) Nick S. Jones and T.M. Stace Interconversion of Nonlocal Correlations Phys. Rev. A 72, 052312 (2005) Nick S. Jones and Lluis Masanes Mediated Digraphs and Quantum Nonlocality Discrete Appl. Math. 150, 41
(2005) Gregory Gutin,
Nick S. Jones, Arash Rafiey,
Simone Severini, Anders Yeo The Extent of Multi-particle Quantum Non-locality Physical Review A 71, 042329
(2005) Nick S. Jones, Noah Linden,
Serge Massar Phys. Rev. A 71, 012324 (2005) Nick S. Jones and Noah Linden
|